Tuesday, November 28, 2006

HW 9 - SP2 - Affinity Chromatography to Purify an Antibody - 5 pts

We need to purify an antibody which is to used as an affinity adsorbent in the production of a synthetic vaccine. The feed contains 1.63 g antibody and 0.45 g of a protein of similar molecular weight. We use gel permeation chromatography to obtain the following results.
Time(h), Antibody Concentration y1, Impurity Concentration y2
6.42 , 82 , ~ 0
7.00 , 63 , 0.14
7.60 , 28 , 43 (peak)

a.) Use these reults to plot the antibody and impurity yields as functions of time on the same graph.
b.) Plot the purity as a fuction of time.

9 Comments:

Anonymous Anonymous said...

7.6 is not the "to" for y1, right?

so how can we find the yield for antibody?

12/05/2006 8:15 PM  
Blogger Dr. B said...

Dr. Phil:
That is the correct approach. But I did make a typo/omission in this problem statement. The antibody {t,y} is a peak at 6.42 h and y0 = 82 units.

Yes, t0 = 7.6 h and y0 = 43 units for the impurity.
t0 = 6.42 h and y0 = 82 units for the antibody.

12/05/2006 9:21 PM  
Blogger Dr. B said...

Anon:
t0 = 7.6 h and y0 = 43 units for the impurity.
t0 = 6.42 h and y0 = 82 units for the antibody.

12/05/2006 9:23 PM  
Blogger Dr. B said...

Again the yield is defined from t' = 0 in the lab, but from t' = -infinity in the Gaussian peak and yield equations.

12/06/2006 2:49 PM  
Blogger Dr. B said...

In making the plots in Excel, you may run into some quirks with Excel's error function.

Erf(-#) => error #NUM
Erf(-#) = - Erf(#)
One way around this is to use the ABS and SIGN functions in Excel.
Try using: SIGN(#) * Erf( ABS(#) ) instead of erf(#) when you are calculating the yield. SIGN(#) gives -1 when #<0, +1 when #>0 and 0 when #=0.
Erf(30) => error #NUM, this should not be an error ! Erf(30) = 1.

12/06/2006 2:58 PM  
Anonymous Anonymous said...

how to calculate the purity? what is the total volume of the feed?

12/06/2006 5:55 PM  
Anonymous Anonymous said...

For the purity, should we use the mass given to find the respective mole fractions? Or is the yo referring to the yo given?

12/06/2006 7:27 PM  
Blogger Dr. B said...

Purity is defined in the PPT from Mon, slide 3.
I don't understand why you want to know the total volume of the feed. You can make your plot go from V = 0 to any final V that makes your graphs look complete.

12/06/2006 8:12 PM  
Blogger Dr. B said...

jack daniels:
The y0 is the y0 that you "determined" from the given data.

12/06/2006 8:13 PM  

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